Cheng Zeng

Postdoctoral associate at University of Florida.

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Contact: +1 (401) 396-6668

Email:c.zeng@ufl.edu

Hi! I’m currently a postdoctoral researcher at the University of Florida. Before joining UF, I was a postdoctoral fellow at the Experiential AI Institute and the Roux Institute of Northeastern University. I received my Ph.D. in Chemical Engineering and an M.S. in Data Science in 2022 from Brown University.

My research lies at the intersection of computational materials science, computational chemistry, and artificial intelligence. I develop generative models, machine learning interatomic potentials, and physics-based phenomenological models to accelerate the discovery and design of complex materials for a sustainable future.

I’m currently on the faculty job market—welcome to connect!

Recent news [archive]

2025/07 Our paper MolGuidance, a follow-up work of PropMolFlow, has been accepted in ICML 2025 Generative AI for Biology (GenBio) Workshop. In this work, we integrate three advanced property‐guidance strategies—classifier‐free guidance, autoguidance, and model guidance—into an SE(3)‐equivariant flow‐matching framework for conditional molecule generation.
2025/05 Our PropMolFlow framework—now available online—uses flow matching parameterized by an SE(3)-equivariant graph neural network for conditional molecular generation. We demonstrate competitive performance against state-of-the-art diffusion models across a range of molecular properties, while maintaining high structural validity, stability, and sampling efficiency. To support reproducibility and further research, we also release two datasets: (1) DFT-computed properties for molecules generated with PropMolFlow, and (2) an updated QM9 SDF file (based on the DeepChem release) in which all bond-order and charge inconsistencies have been corrected.
2025/01 I officially joined University of Florida Department of Chemistry as a postdoc to work on molecular-graph generative modeling and AI-driven computational simulations.

Selected publications [full list]

  1. d_vae_hea.png
    Data-efficient and Interpretable Inverse Materials Design using a Disentangled Variational Autoencoder
    Cheng Zeng, Zulqarnain Khan, and Nathan L. Post
    AI & Materials, Dec 2024
  2. ml-hea-corr.png
    Machine learning accelerated discovery of corrosion-resistant high-entropy alloys
    Cheng Zeng, Andrew Neils, Jack Lesko, and Nathan Post
    Computational Materials Science, Mar 2024
  3. copt-np-structures.png
    Phase Stability of Large-Size Nanoparticle Alloy Catalysts at Ab Initio Quality Using a Nearsighted Force-Training Approach
    Cheng Zeng, Sushree Jagriti Sahoo, Andrew J. Medford, and Andrew A. Peterson
    J. Phys. Chem. C, Dec 2023
  4. strain-trends.png
    Strain in Catalysis: Rationalizing Material, Adsorbate, and Site Susceptibilities to Biaxial Lattice Strain
    Cheng Zeng, Tuhina Adit Maark, and Andrew A. Peterson
    J. Phys. Chem. C, Dec 2022
  5. nft.png
    A nearsighted force-training approach to systematically generate training data for the machine learning of large atomic structures
    Cheng Zeng, Xi Chen, and Andrew A. Peterson
    The Journal of Chemical Physics, Feb 2022